Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 26 Aligned Residues 313 % Identity 20% Template c3fhlC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from bacteroides2 fragilis nctc 9343 Resolution 1.93 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E
Query Conservation
Alig confidence																																												.	.	.
Template Conservation																																												.	.	.
Template Sequence		E	I	I	K	T	G	L	A	A	F	G	M	S	G	Q	V	F	H	A	P	F	I	S	T	N	P	H	F	E	L	Y	K	I	V	E	R	S	K	E	L	S	K	.	.	.	E	R	Y	P	Q	A	S	I	V	R	S	F	K	E	L	T	E	D	P	E	I	D	L	I	V	V	N	T	P	D	N	T	H	Y	E
Template Known Secondary structure									S			S							T								T	T									S	S			G	G	G	.	.	.	T	T		T	T	S				S		S					T		T	T								S		G	G	G
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	P
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Y	A	G	M	A	L	E	A	G	K	N	V	V	V	E	K	P	F	T	S	T	T	K	Q	G	E	E	L	I	A	L	A	K	K	K	G	L	M	L	S	V	Y	Q	N	R	R	W	D	A	D	F	L	T	V	R	D	I	L	A	K	S	L	L	G	R	L	V	E	Y	E	S	T	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T							S	S			S	S															T								G	G	G	G													T	T	T	T	S	S								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G
Query Conservation
Alig confidence		.	.	.	.																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	F	A	R	Y	R	N	F	I	G	G	L	T	Y	N	L	G	S	H	L	I	D	Q	A	I	Q	L	F	G	.	.	M	P	E	A	V	F	A	D	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	G	G	K	V	D	D	Y	F	I	I	H	L	L	H	P	S	L	A
Template Known Secondary structure		.	.	.	.				B											T														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T			S												T	T
Template Predicted Secondary structure		.	.	.	.																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.																										.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	V	K	I	T	L	K	A	S	Y	L	M	R	E	A	E	P	R	F	A	L	H	G	T	L	G	S	Y	V	K	Y	G	V	D	K	Q	E	A	A	L	L	A	G	E	I	P	E	R	P	N	W	G	E	E	S	E	Q	E	W	G	L	L	H	T	E	I	N	G	K	E	I	C	R	K	Y	P	G	I	A
Template Known Secondary structure		T	T	S								S	B		S	S				S						S	S							S			S							T	T			T	T	S	T	T	T	T				T	T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	R	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	Y	G	G	F	Y	Q	N	I	Y	E	H	L	C	L	G	Q	P	L	E	T	H	A	Q	D	I	L	N	V	I	R	I	I	E	A	A	Y	Q	S	H	R	E	N	K	I	V	N	L
Template Known Secondary structure				T	T																	S		B																					T	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions