Phyre 2 alignment of P77503 with c3e82A

Job Description P77503
Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012

Rank 32 Aligned Residues 305

% Identity 21% Template c3e82A_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from2 klebsiella pneumoniae

Resolution 2.04 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H	T
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence	I	N	I	A	L	I	G	Y	G	F	V	G	K	T	F	H	A	P	L	I	R	S	V	P	G	L	N	L	A	F	V	A	S	R	D	E	E	K	V	K	.	.	.	R	D	L	P	D	V	T	V	I	A	S	P	E	A	A	V	Q	H	P	D	V	D	L	V	V	I	A	S	P	N	A	T	H	A	P	L	A
Template Known Secondary structure									S						T							T	S	T	T									S							.	.	.				T	T	S				S							T		T	T		S						S		G	G	G
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
	16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	P	G	W
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence	R	L	A	L	N	A	G	K	H	V	V	V	D	K	P	F	T	L	D	X	Q	E	A	R	E	L	I	A	L	A	E	E	K	Q	R	L	L	S	V	F	H	N	R	R	W	D	S	D	Y	L	G	I	R	Q	V	I	E	Q	G	T	L	G	A	V	K	H	F	E	S	H	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T							S		S		S	S														T	T										T	T														T	T	T		S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
	93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G	I	L
Query Conservation
Alig confidence	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	F	D	R	F	R	P	E	V	S	G	L	W	F	D	L	G	P	H	L	I	D	Q	A	L	Q	L	F	G	L	P	Q	S	V	Q	G	N	I	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	G	A	E	I	N	D	W	A	H	V	V	L	N	Y	P	A	H	K	V	I
Template Known Secondary structure	.	.				B																											S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T			S											S	S
Template Predicted Secondary structure	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																							.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D	N	R	H	L	R
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation													.	.	.	.																																																							.	.
Template Sequence	L	H	C	S	X	L	V	A	G	G	S	S	.	.	.	.	R	F	T	V	H	G	D	K	G	S	V	I	K	A	R	A	D	Q	Q	E	S	Q	L	L	A	G	V	V	P	G	S	A	D	W	G	Q	D	D	D	P	L	V	I	Y	D	A	S	L	Q	A	H	A	Q	A	.	.	T	P	Q	G	D	Q	R	Q
Template Known Secondary structure					S	B			S				.	.	.	.	S						S	S							S											T			T	T	S	T	T	T	T				S							T	T	S							.	.						T
Template Predicted Secondary structure													.	.	.	.																																																							.	.
Template SS confidence
	236	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.

	308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	R	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Y	Y	X	L	I	R	D	A	L	K	G	Q	I	A	N	P	V	P	P	V	E	A	L	A	V	X	A	V	L	E	A	A	V	R	S	A	E	S	G	X	V	Q	T	L
Template Known Secondary structure										T	T	S	S			S	S																						S	S		B
Template Predicted Secondary structure
Template SS confidence
	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions