Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 16 Aligned Residues 323 % Identity 23% Template c3dtyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from pseudomonas2 syringae Resolution 2.04 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.						70	.
Predicted Secondary structure																		.	.	.																						.																					.	.											.	.	.	.	.
Query SS confidence																		.	.	.																						.																					.	.											.	.	.	.	.
Query Sequence		S	A	M	T	S	S	P	L	R	V	A	I	I	G	A	G	.	.	.	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	.	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	.	.	V	W	D	D	P	Q	A	M	L	L	.	.	.	.	.	A	V
Query Conservation																		.	.	.																						.																					.	.											.	.	.	.	.
Alig confidence						.												.	.	.						.																.																					.	.											.	.	.	.	.
Template Conservation						.																				.
Template Sequence		R	R	I	P	.	Q	P	I	R	W	A	X	V	G	G	G	S	Q	S	Q	I	G	Y	I	.	H	R	C	A	A	L	R	D	N	T	F	V	L	V	A	G	A	F	D	I	D	P	I	R	G	S	A	F	G	E	Q	L	G	V	D	S	E	R	C	Y	A	D	Y	L	S	X	F	E	Q	E	A	R	R	A	D
Template Known Secondary structure				S		.	S											T	T		S	S				.							G	G	G	S										S	S											T	T			G	G	G	B		S	S									T	T		T	T
Template Predicted Secondary structure						.																				.
Template SS confidence
		6	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	Q	A	V	S	I	A	T	P	N	G	T	H	Y	S	I	T	K	A	A	L	E	A	G	L	H	V	V	C	E	K	P	L	C	F	T	V	E	Q	A	E	N	L	R	E	L	S	H	K	H	N	R	I	V	G	V	T	Y	G	Y	A	G	H	Q	L	I	E	Q	A	R	E	X	I	A	A	G	E	L	G
Template Known Secondary structure				S						S		G	G	G											T	T							S		S		S															T	T								G	G	G	G	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	R	X	V	H	X	Q	F	A	.	.	.	.	.	.	.	.	.	.	H	G	F	H	S	A	G	P	S	Y	V	L	G	D	V	G	T	H	P	L	Y	L	S	E	V	X	L	P	D	L	K	I	K	R	L	X	C	S	R	Q	S	F	V	A	S	R	A	P	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S										.	.	.	.	.	.	.	.	.	.			T	T						S					T	T												T	T													S	S	G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.											.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																			.	.	.																						.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.																						.	.	.	.	.	.	.
Query Sequence		S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G	I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	.	.	.	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.																						.	.	.	.	.	.	.
Alig confidence		.																											.																						.	.	.																						.	.	.	.	.	.	.
Template Conservation		.																											.
Template Sequence		.	L	E	D	N	A	Y	T	L	X	E	Y	E	G	G	A	X	G	X	V	W	S	S	A	V	N	A	.	G	S	X	H	G	Q	K	I	R	V	I	G	S	R	A	S	L	E	W	W	D	E	R	P	N	Q	L	S	F	E	V	Q	G	Q	P	A	Q	I	L	E	R	G	X	G	Y	L	H	P	N	A	L	I
Template Known Secondary structure		.	S		S									T	T	S									S			T	.	T		S										S	S							T	T	S	T	T							T	T	S							T	T		T	T	S		G	G	G	T	T
Template Predicted Secondary structure		.																											.
Template SS confidence
			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
														302	.	.	.	.	.	.	.	310	.	.	.	.	.										.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	N	R	H	L	R	S	M	E	A	F	I	N	H	.	.	.	.	.	.	.	.	.	V	Q	G	K	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	.	R	V	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		D	D	R	I	G	G	G	H	P	E	G	L	F	E	A	W	A	N	L	Y	Y	R	F	A	L	A	X	D	A	T	D	R	S	D	T	Q	A	L	S	A	V	R	Y	P	G	I	D	A	G	V	E	G	V	R	W	V	E	R	C	V	L	S	A	D	N	D	S	I	W	V	A	Y
Template Known Secondary structure		T			S		T	T	S																								T	T							T																									T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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