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Job DescriptionP77503
Confidence96.00%DateThu Jan 5 12:30:02 GMT 2012
Rank428Aligned Residues122
% Identity11%Templatec3donA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  RVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTL
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Template Sequence  YILILGAGGASKGI. ANELYKI. VRPTLTVANRTMSRFNNWSLNINK. INLSHAESHLD. . EFDIIINTTPDSV. . . . IS
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S.TT.

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TGG..G
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S....S
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   119120.........130.. ....... 140.........150.........160... ......170.... .....180....... ..
 
   91........100.........110.........120.........130.........140....
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Query Sequence  MALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQ
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Template Sequence  LNRLASHTLVSD. . IVYNPYK. TPILIEAEQRGNPIYNGLDMFVHQGAESFKIW
Template Known Secondary structure 
TT

SS
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   197..200........ .210..... ....220.........230.........240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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