Job Description P77503 Confidence 97.24% Date Thu Jan 5 12:30:02 GMT 2012 Rank 254 Aligned Residues 93 % Identity 27% Template c3docD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate2 dehydrogenase from brucella melitensis Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																						.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	.	.	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.					.	.																		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																								.	.
Template Sequence		V	R	V	A	I	N	G	F	G	R	I	G	R	N	I	.	L	R	A	I	V	E	S	G	R	T	D	I	Q	V	V	A	I	N	D	L	G	P	V	.	.	E	T	N	A	H	L	L	R	Y	D	S	V	H	G	R	F	P	K	E	V	E	V	A	G	D	T	I	D	V	G	Y	G	P	I	K	V	H	A	V
Template Known Secondary structure								S		S							.								T			S									S	S			.	.											T	T	T		S		S	S						T	T				S	S	S	S
Template Predicted Secondary structure																	.																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
													72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H	T	L	M	A	L	E	A	G	.	C	H	V	M	C	E	K	P	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		R	N	P	A	E	L	P	W	K	E	E	N	V	D	I	A	L	E	C	T	G	I	F	T	S	R	D	K	A	A	L	H	L	E	A	G	A	K	R	V	I	V	S	A	P	A
Template Known Secondary structure		S		G	G	G	S						T		S						S	S	S			S					T						T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions