Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 18 Aligned Residues 343 % Identity 16% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

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		8	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.	.	.																.																											.	.
Query SS confidence												.	.	.																.																											.	.
Query Sequence		S	P	L	R	V	A	I	I	G	A	.	.	.	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	.	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	.	.	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P
Query Conservation												.	.	.																.																											.	.
Alig confidence												.	.	.																.																											.	.
Template Conservation
Template Sequence		A	P	I	R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	S	S	Q	F	Q	I	T	A	L	Y	S	P	K	I	E	T	S	I	A	T	I	Q	R	L	K	L	S	N	A	T	A	F	P	T	L	E	S	F	A	S	S	S	T	I	D	M	I	V	I	A	I	Q
Template Known Secondary structure										S			S	S	S	S	S	G	G	G	T								T	T	T	T									S	S											T	T		T	T					S	S								S	S		S						S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		N	R	F	H	Y	E	H	T	L	M	A	L	E	A	G	.	.	.	.	.	.	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	S	H	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	E	S	I	Y	K	A	A	A	E	R	G	V	Q	T	I	I	S	L	Q	G	R	K	S	P	Y	I	L	R	A	K	E	L	I	S	Q	G	Y	I	G	D	I	N	S
Template Known Secondary structure		G	G	G												G	G	G		T	T								S	S			S	S															T								G	G	G	G													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																																																						.	.
Query SS confidence												.	.	.	.																																																						.	.
Query Sequence		T	T	A	R	A	L	R	R	C	G	.	.	.	.	V	P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	.	.	S	C	G	Q	F	G	E	W	D	P	A
Query Conservation												.	.	.	.																																																						.	.
Alig confidence												.	.	.	.																																				.																		.	.
Template Conservation																																																			.
Template Sequence		I	E	I	A	G	N	G	G	W	Y	G	Y	E	R	P	V	K	S	P	K	Y	I	Y	E	I	G	N	G	V	D	L	V	T	T	T	F	G	H	T	I	D	I	L	Q	Y	M	T	S	S	.	Y	F	S	R	I	N	A	M	V	F	N	N	I	P	E	Q	E	L	I	D	E	R	G	N	R	L	G	Q	R	V
Template Known Secondary structure									S	S		S	S				T	T	S		G	G	G	G	S	T	T	S	S		S	T	T	T	T														T		.														S							S	S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.									.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																											.	.	.	.	.	.	.	.
Query SS confidence																													.	.																											.	.	.	.	.	.	.	.
Query Sequence		T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G	I	L	W	L	E	T	S	F	A	.	.	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	.	.	.	.	.	.	.	.	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I
Query Conservation																													.	.																											.	.	.	.	.	.	.	.
Alig confidence																													.	.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	T	V	P	D	H	L	L	F	Q	G	T	L	L	N	G	N	V	P	V	S	C	S	F	K	G	G	K	P	T	K	K	F	T	K	N	L	V	I	D	I	H	G	T	K	G	D	L	K	L	E	G	D	A	G	F	A	E	I	S	N	L	V	L	Y	Y	S	G	T	R	K	E	I	M	K	V	Y	H	L
Template Known Secondary structure					S		S									T	T	T	T										S	S	S			S	S	S		S								S	S								S	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.														.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	D	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	R	V	E	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	Y	N	A	I	V	G	N	I	H	R	L	Y	Q	S	I	S	D	F	H	F	N	T	S	Q	F	V	M	Q	G	F	D	F	E	G	F	P	T	L	M	D	A	L	I	L	H	R	L	I	E	S	V	Y	K	S	N	M	M	G	S	T	L	N	V
Template Known Secondary structure		T	T																				T	T					S			T	T		S	S	S																								T	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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