Return to main results Retrieve Phyre Job Id

Job DescriptionP77503
Confidence98.70%DateThu Jan 5 12:30:02 GMT 2012
Rank93Aligned Residues129
% Identity9%Templatec2uyyD_
PDB info PDB header:cytokineChain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRF
Query Conservation 
    


 


 
          
       



 
         
              

    

 
 
 

   
Alig confidence 



















.






.




.














..












..












Template Conservation 
     

 




 

  
.
  
   .
  
 .  
        
   ..
        
 
 ..        
    
Template Sequence  ITPTDKKIGFLGLGLMGSGI. VSNLLKM. GHTVT. VWNRTAEKCDLFIQE. . GARLGRTPAEVVS. . TCDITFACVSDPK
Template Known Secondary structure 



SS

S.T.T
.
SSGGGGT..T

S
..
S

SS
Template Predicted Secondary structure 








.
.

.


..



..





Template SS confidence 















































































   263......270.........280.. ....... 290.... .....300......... 310.........320.. .......330.....
 
   85....90.........100....... ..110.........120.........130.........140
Predicted Secondary structure 









.....







Query SS confidence 






















. . . . .
































Query Sequence  HYEHTLMALEAGCHVMCEKPPAM. . . . . TPEQAREMCDTARKLGKVLAYDFHHRFALDTQQ
Query Conservation 
      

  

 
  


   .....   
   
   
        
    
  
    
Alig confidence 






















.....
































Template Conservation                           
                                   
Template Sequence  AAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSND
Template Known Secondary structure  STT
GGGG

TT

S


TT


S
Template Predicted Secondary structure 
























Template SS confidence 




























































   336...340.........350.........360.........370.........380.........390......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions