Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 22 Aligned Residues 324 % Identity 17% Template c2q4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable oxidoreductase at4g09670; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at4g09670 Resolution 2.49 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	.	.	.	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H
Query Conservation																																																				.	.	.
Alig confidence																.																																				.	.	.
Template Conservation																.
Template Sequence		Q	I	R	I	G	V	X	G	C	A	D	I	A	R	.	K	V	S	R	A	I	H	L	A	P	N	A	T	I	S	G	V	A	S	R	S	L	E	K	A	K	A	F	A	T	A	N	N	Y	P	E	S	T	K	I	H	G	S	Y	E	S	L	L	E	D	P	E	I	D	A	L	Y	V	P	L	P	T	S	L	H
Template Known Secondary structure									S			T				.							T	T		S	S									S												T	T			T	T	S				S							T		T	T										G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		Y	E	H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	.	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		V	E	W	A	I	K	A	A	E	K	G	K	H	I	L	L	E	K	P	V	A	X	N	V	T	E	F	D	K	I	V	D	A	C	E	A	N	G	V	Q	I	X	D	G	T	X	W	V	H	N	P	R	T	A	L	L	K	E	F	L	S	D	S	E	R	F	G	Q	L	K	T	V	Q	S	C	F	S	F	A	G
Template Known Secondary structure											T	T							S	S			S	S														T	T								G	G	G	T	S													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	V	P	G	.	.	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E
Query Conservation						.	.
Alig confidence						.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	D	F	L	K	N	D	I	R	V	K	P	G	L	D	G	L	G	A	L	G	D	A	G	W	Y	A	I	R	A	T	L	L	A	N	N	F	E	L	P	K	T	V	T	A	F	P	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	N	E	A	G	V	I	L	S	C	G	A	S	L	S
Template Known Secondary structure										T	T	T	S	S	S	T	T	T	T	T					T												T	T	T				S						S			.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.															.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	H	N	G	G	I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D	N	R
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		W	E	D	G	R	T	A	T	I	Y	C	S	F	L	A	N	L	T	X	.	.	.	.	E	I	T	A	I	G	T	K	G	T	L	R	V	H	D	F	I	I	P	Y	K	E	T	E	A	S	F	T	T	S	T	K	A	W	F	N	D	L	V	T	A	W	V	S	P	P	S	E	H	T	V	K	T	E	L	P	Q
Template Known Secondary structure			S	S	S									S							.	.	.	.							S	S						S		S	S	S		S		T	T									S			B		T	T	S	S	S	B	S	S										S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	.	T	R	V	E	L
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		E	A	C	X	V	R	E	F	A	I	K	N	N	G	A	K	P	D	G	Y	W	P	S	I	S	R	K	T	Q	L	V	V	D	A	V	K	E	S	V	D	K	N	Y	Q	Q	I	S	L
Template Known Secondary structure												T	T	T						S																					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions