Job Description P77503 Confidence 97.57% Date Thu Jan 5 12:30:02 GMT 2012 Rank 219 Aligned Residues 123 % Identity 17% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	.	.	.	Y	E
Query Conservation																																																																													.	.	.
Alig confidence																.								.				.																					.												.	.															.	.	.
Template Conservation																.								.				.																					.												.	.
Template Sequence		S	I	L	V	L	G	A	G	G	A	S	R	A	V	.	I	Y	A	L	V	K	E	.	G	A	K	.	V	F	L	W	N	R	T	K	E	K	A	I	K	L	A	Q	K	F	P	L	.	E	V	V	N	S	P	E	E	V	I	D	.	.	K	V	Q	V	I	V	N	T	T	S	V	G	L	K	D	E	D	P	E
Template Known Secondary structure									S							.							T	.	T			.						S	S											S			.				S		G	G	G	T	G	G	.	.	G		S						S	S	T	T	S	S	T	T
Template Predicted Secondary structure																.								.				.																					.												.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.		.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q
Query Conservation
Alig confidence																	.	.						.	.	.
Template Conservation																	.	.						.	.	.
Template Sequence		I	F	N	Y	D	L	I	K	K	D	H	V	V	V	D	.	.	I	I	Y	K	E	.	.	.	T	K	L	L	K	K	A	K	E	K	G	A	K	L	L	D	G	L	P	M	L	L	W	Q	G	I	E	A	F	K	I	W
Template Known Secondary structure		S	S		G	G	G			T	T						.	.		S	S	S		.	.	.										T	T						S
Template Predicted Secondary structure																	.	.						.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions