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Job DescriptionP77503
Confidence100.00%DateThu Jan 5 12:30:02 GMT 2012
Rank5Aligned Residues323
% Identity26%Templatec2glxD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:1,5-anhydro-d-fructose reductase; PDBTitle: crystal structure analysis of bacterial 1,5-af reductase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  RVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTL
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Template Sequence  RWGLIGASTIARE. WVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL
Template Known Secondary structure 


.TTTT

S
TT
S

BS
T
TT


S
GGG
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   3......10..... ....20.........30.........40.........50.........60.........70.........80.
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  MALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWG
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Template Sequence  AAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIAARVFHAVYLPPHLQG
Template Known Secondary structure  TT

SS

SSTT




GGGSTTTTSS
B

GGG
S
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  VFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILW
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Template Sequence  WRLERPEAGGGVILDITVHDADTLRFVLND. DPAEAVAISHSAGMGKEG. . . . . . . . . . . . . VEDGVMGVLRFQSGVIAQ
Template Known Secondary structure  GGGS
GGGT
STTT
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SSS
SS.............

STTS
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   162.......170.........180.........190. ........200......... 210.........220.......
 
   251........260.........270......... 280.........290.........300.........310.........320......
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Query Sequence  LETSFALNIREQSIMNVSFCGDKAGATLF. . . . PAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADA
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Template Sequence  FHDAFTTKFAET. . . GFEVHGTEGSLIGRNVMTQKPVGTVTLRNAEGESQLPLDPANLYETALAAFHSAIEGHGQPSATG
Template Known Secondary structure  SB
TT


...SS
S
SSSSS

SSS







TS


SSB
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   228.230......... 240.........250.........260.........270.........280.........290.........300....
 
   327..330.........340.........350.
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Query Sequence  EQGYIIQQLVAALYQSAETGTRVEL
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Template Conservation   
      
  
   
   
  
 
Template Sequence  EDGVWSLATGLAVVKAAATGQAAEI
Template Known Secondary structure  SS

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   305....310.........320.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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