|   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | V | A | I | I | G | A | G | Q | V | A | D | K | V | H | A | S | Y | Y | C | T | R | N | D | L | E | L | V | A | V | C | D | S | R | L | S | Q | A | Q | A | L | A | E | K | Y | G | N | A | S | V | W | D | D | P | Q | A | M | L | L | A | V | K | P | D | V | V | S | V | C | S | P | N | R | F | H | Y | E | H | T |
Query Conservation |   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|   |
|
|   | . |   |   |   |   |   |
|   |   | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   | . |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | L | V | G | L | I | G | Y | G | A | I | G | K | . |
F | L | A | E | W | L | E | R | . |
N | G | F | E | I | A | A | I | L | D | V | R | G | E | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | M | V | R | G | I | D | E | F | L | . |
Q | R | E | M | D | V | A | V | E | A | A | S | Q | Q | A | V | K | D | Y | A |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  | . |  |  |  |  |  |  |  |  | . | T | T |
|  |  |  |  |  |  |
| S | S |
|
|
| . | . | . | . | . | . | . | . | . | . | T | T |  |  | S | S |  |  |  |  | T | . | T | S |
|
| S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | A | L | E | A | G | C | H | V | M | C | E | K | P | P | A | M | T | P | E | Q | . |
A | R | E | M | C | D | T | A | R | K | L | G | K | V | L | A | Y | D | F | H | H | . |
R | F | A | L | D | T | Q | Q | L | R | E | Q | V | T | N | G | V | L | G | E | I | Y | V | T | T | A | R | A | L | R | R | C | G | V | P |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   | . |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
E | K | I | L | K | A | G | I | D | L | I | V | L | S | T | G | A | F | A | D | R | D | F | L | S | R | V | R | E | V | C | R | K | T | G | R | R | V | Y | I | A | S | G | A | I | G | G | L | D | A | I | F | S | A | S | E | L | I | E | E | . |
. |
. |
. |
. |
I | V | L | T | T | R | K | N | W | R | Q | F | G | R | K |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|  |  |  |  | S |
| G | G | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
| T | T |
| S |
|  |  |  |  |  |  | T | G | G | G |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | G | G | G | T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | W | G | V | F | T | N | K | E | L | Q | G | G | G | P | L | I | D | I | G | I | H | M | L | D | A | A | M | Y | V | L | G | F | P | A | V | K | S | V | N | A | H | S | F | Q | K | I | G | T | Q | K | S | C | G | Q | F | G | E | W | D | P | A | T | Y | S | V | E | D | S | L | F | G | T | I | E | F | H | N | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |
|   |   |   | . | . |   |   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | V | I | F | E | G | S | A | S | E | A | A | Q | K | F | P | K | N | L | N | V | A | A | T | L | S | I | A | S | G | K | D | . |
. |
V | K | V | R | L | V | A | D | E | V | E | E | N | I | H | E | I | L | V | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | F | G | E | M | E | I | R | V | R | N | R | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  | S | S |
| . | . |
|  |  |  |  |  |  |  | S |
| S | S |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
|
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
248 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
I |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
M |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
209 |
  |