Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 35 Aligned Residues 303 % Identity 15% Template c1xeaD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae Resolution 2.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H
Query Conservation
Alig confidence																																.																																	.
Template Conservation																																.																																	.
Template Sequence		S	L	K	I	A	X	I	G	L	G	D	I	A	Q	K	A	Y	L	P	V	L	A	Q	W	P	D	I	E	L	V	.	L	C	T	R	N	P	K	V	L	G	T	L	A	T	R	Y	R	V	S	A	T	C	T	D	Y	R	D	V	L	Q	Y	G	.	V	D	A	V	X	I	H	A	A	T	D	V	H	S	T	L
Template Known Secondary structure																	T							S		T	T					.				S												T	T						S	S	G	G	G	G	G	G	G		.		S						S		G	G	G
Template Predicted Secondary structure																																.																																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	P	G
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		A	A	F	F	L	H	L	G	I	P	T	F	V	D	K	P	L	A	A	S	A	Q	E	C	E	N	L	Y	E	L	A	E	K	H	H	Q	P	L	Y	V	G	F	N	R	R	H	I	P	L	Y	N	Q	H	L	S	E	L	A	Q	Q	E	C	G	A	L	R	S	L	R	W	E	K	H	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T							S	S	S	S	S	S													T	T	T								G	G	G															T	S		T	T		S								.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G	I
Query Conservation
Alig confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		.	.	.	R	H	A	L	P	G	D	I	R	T	F	V	F	D	D	F	I	H	P	L	D	S	V	N	L	S	R	Q	C	N	L	D	D	L	H	L	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	X	S	E	G	L	L	A	R	L	D	V	Q	W	Q	T	G	D	.	.	.
Template Known Secondary structure		.	.	.		B	S			B									T	T										S				S		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T												T	T	.	.	.
Template Predicted Secondary structure		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D	.	.	.	.	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I	A
Query Conservation																																																								.	.	.	.
Alig confidence		.																																																						.	.	.	.
Template Conservation		.
Template Sequence		.	T	L	L	H	A	S	X	N	R	Q	F	G	I	T	T	E	H	V	T	A	S	Y	D	N	V	A	Y	L	F	D	S	F	T	Q	G	K	X	W	R	D	N	Q	E	S	R	V	A	L	K	D	W	T	P	X	L	A	S	K	G	F	D	A	X	V	Q	D	W	L	Q	V	A	A	A	G	K	L	P	T	H
Template Known Secondary structure		.									T	T	B	S	S										S	S						S	S	S	S							T	T									T	T							T	T															T
Template Predicted Secondary structure		.
Template SS confidence
			209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	E	R	N	L	A	S	H	Q	L	A	E	A	I	C	Q	Q	I	T	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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