Job Description P77503 Confidence 98.99% Date Thu Jan 5 12:30:02 GMT 2012 Rank 81 Aligned Residues 154 % Identity 16% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

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		8	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																							60	.	.
Predicted Secondary structure												.																		.							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																		.							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	L	R	V	A	I	I	G	A	.	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	.	L	E	L	V	A	V	.	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	W	D
Query Conservation												.																		.							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.								.										.							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		Q	P	R	T	V	T	V	L	G	A	T	G	S	I	G	H	S	T	.	L	D	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E	A	A	A
Template Known Secondary structure										T	T	T	S							.							T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S
Template Predicted Secondary structure																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		63	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		D	P	Q	A	M	L	L	.	.	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q
Query Conservation									.	.
Alig confidence									.	.																																			.																								.	.	.	.	.
Template Conservation																																													.																								.	.	.	.	.
Template Sequence		G	A	D	A	L	V	E	A	A	M	M	G	A	D	W	T	M	A	A	I	I	G	C	A	G	L	K	A	T	L	A	A	I	R	K	G	K	T	V	A	L	A	N	.	K	E	S	L	V	S	A	G	G	L	M	I	D	A	V	R	E	H	G	T	T	L	L	.	.	.	.	.	P	V	D	S	E	H	N	A
Template Known Secondary structure		S									T	S			S								S	G	G	G										T	T	S							.	T																		T					.	.	.	.	.			S
Template Predicted Secondary structure																																													.																								.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	Q	C	F	P	H	H	N	R	D	Y	V	R	R	I	I	I	T	A	S	G	G	P	F	R	T	T
Template Known Secondary structure								T	T		G	G	G												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions