Return to main results Retrieve Phyre Job Id

Job DescriptionP77503
Confidence97.05%DateThu Jan 5 12:30:02 GMT 2012
Rank281Aligned Residues81
% Identity19%Templatec1ojuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:malate dehydrogenase; PDBTitle: 2.8 a resolution structure of malate dehydrogenase from2 archaeoglobus fulgidus in complex with etheno-nad.
Resolution2.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50..... ....60.........70.........
Predicted Secondary structure 










..........










Query SS confidence 













































. . . . . . . . . .























Query Sequence  LRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKY. . . . . . . . . . GNASVWDDPQAMLLAVKPDVVSVC
Query Conservation 


 


 
          
       



 
         
   ..........           

    

 
 
 
Alig confidence 




























.















..........











...








Template Conservation 


 




 

   
  
       

 .
 

      
 
 

            
    
   
...  






Template Sequence  MKLGFVGAGRVGSTSAFTCLLNLDVDEIA. LVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL. . . KGSEIIVVT
Template Known Secondary structure 


SS

S.
SSTTT


S
GGGG...TT
S
Template Predicted Secondary structure 









.










...




Template SS confidence 















































































   22.......30.........40.........50 .........60.........70.........80........ .90.......
 
   80.........90....
Predicted Secondary structure  .....



Query SS confidence  . . . . .














Query Sequence  . . . . . SPNRFHYEHTLMALE
Query Conservation  .....

   
      

 
Alig confidence  .....














Template Conservation 

        
  
   
  
Template Sequence  AGLARKPGMTRLDLAHKNAG
Template Known Secondary structure 





SS

Template Predicted Secondary structure 








Template SS confidence 



















   98.100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions