Return to main results Retrieve Phyre Job Id

Job DescriptionP77503
Confidence96.73%DateThu Jan 5 12:30:02 GMT 2012
Rank344Aligned Residues131
% Identity15%Templatec1nvtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50..... ....60.........70......
Predicted Secondary structure 















........










Query SS confidence 


















































. . . . . . . .




















Query Sequence  MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKY. . . . . . . . GNASVWDDPQAMLLAVKPDVV
Query Conservation 
    


 


 
          
       



 
         
   ........           

    

 
Alig confidence 



















.







..


.















........













..




Template Conservation       
 









 

.   
    .. 
 .
 


  

  

                   
   
 ..  


Template Sequence  GRVKDKNIVIYGAGGAARAV. AFELAKDN. . NII. IANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLD. . GVDII
Template Known Secondary structure 



S


S.TSSS...
SST


TT


T..T

Template Predicted Secondary structure 







.



...











..

Template SS confidence 















































































   124.....130.........140... ......150. ... .....160.........170.........180.........190.. .....
 
   77..80........ .90.........100.........110.........120.........130.........140....
Predicted Secondary structure 



.....

















Query SS confidence 











. . . . .























































Query Sequence  SVCSPNRFHYEH. . . . . TLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQ
Query Conservation   
 

   
   .....   

  

 
  


      
   
   
        
    
  
     
  
Alig confidence 











.....













..






.































Template Conservation 




 
               
     
 
..  
 
  .
 

  
   
     
  

  

  

 

Template Sequence  INATPIGMYPNIDVEPIVKAEKLREDMVVMD. . LIYNPLE. TVLLKEAKKVNAKTINGLGMLIYQGAVAFKIW
Template Known Secondary structure 
S
TT
TT

SS

SS
STT

SSS..


SSSS.
TTT

T
Template Predicted Secondary structure 






















..




.






Template SS confidence 








































































   198.200.........210.........220........ .230..... ....240.........250.........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions