Job Description P77503 Confidence 97.06% Date Thu Jan 5 12:30:02 GMT 2012 Rank 278 Aligned Residues 124 % Identity 17% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H	.	.
Query Conservation																																																																																.	.
Alig confidence																.								.																															.	.	.	.	.																					.	.
Template Conservation																.								.																															.	.	.	.	.
Template Sequence		K	V	I	V	H	G	S	G	G	M	A	K	A	V	.	V	A	A	F	K	N	S	.	G	F	E	K	L	K	I	Y	A	R	N	V	K	T	G	Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	L	.	.	.	.	.	E	N	Q	Q	A	D	I	L	V	N	V	T	S	I	G	M	K	G	G	K	E	E
Template Known Secondary structure								S	S	T	T					.							T	.	T									S													T					S			.	.	.	.	.	T	T				S						S	S	T	T		T	T	S	T	T	T
Template Predicted Secondary structure																.								.																															.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
						89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.															.	.								.
Template Conservation																				.	.								.
Template Sequence		M	D	L	A	F	P	K	A	F	I	D	N	A	S	V	A	F	D	.	.	V	V	A	M	P	V	E	.	T	P	F	I	R	Y	A	Q	A	R	G	K	Q	T	I	S	G	A	A	V	I	V	L	Q	A	V	E	Q	F	E	L	Y
Template Known Secondary structure		T	S		S	S									S					.	.				S	S	S	S	.										T	T
Template Predicted Secondary structure																				.	.								.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions