Job Description P77503 Confidence 99.95% Date Thu Jan 5 12:30:02 GMT 2012 Rank 51 Aligned Residues 210 % Identity 12% Template c1j5pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate dehydrogenase; PDBTitle: crystal structure of aspartate dehydrogenase (tm1643) from thermotoga2 maritima at 1.9 a resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H
Query Conservation
Alig confidence																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		H	M	T	V	L	I	I	G	M	G	N	I	G	K	K	L	.	.	.	.	.	V	E	L	G	N	F	E	K	I	Y	A	Y	D	R	I	S	K	D	I	.	.	.	.	.	.	.	.	.	.	P	G	V	V	R	L	D	E	F	Q	V	P	S	D	V	S	T	V	V	E	C	A	S	P	E	A	V	K	E	Y
Template Known Secondary structure											S							.	.	.	.	.				S			S							S	S					.	.	.	.	.	.	.	.	.	.	S	S	S				S	S					T	T								S
Template Predicted Secondary structure																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																										.																				.
Query SS confidence																										.																				.
Query Sequence		T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	.	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	.	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V
Query Conservation																										.																				.
Alig confidence																										.																				.																											.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		S	L	Q	I	L	K	N	P	V	N	Y	I	I	I	S	T	S	A	F	A	D	E	V	F	R	E	R	F	F	S	E	L	K	N	S	P	A	R	V	F	F	P	S	G	A	I	G	G	L	D	V	L	S	S	I	K	D	F	V	K	N	V	R	I	E	T	I	K	P	P	K	.	.	.	S	L	G	L	D	L
Template Known Secondary structure						T	T	S	S	S							G	G	G	G	G	S													T		S								T	T											G	G	G												G	G	.	.	.	G	G	T
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	.	D	S	L	F	G	T	I	E	F	H	N
Query Conservation																																																																						.
Alig confidence																																			.																				.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																			.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	K	T	V	V	F	E	G	S	V	E	E	A	S	K	L	F	P	R	N	I	N	V	A	S	T	I	G	L	I	V	G	.	F	E	K	V	K	V	T	I	V	A	D	P	A	M	D	H	N	I	H	.	.	.	.	.	.	.	.	.	.	I	V	R	I	S	S	A	I	G	N	Y	E	F	K	I	E	N
Template Known Secondary structure		S	S																	S	S	S													.	G	G	G									T	T		S	S				.	.	.	.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure																																			.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.											.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		246	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		211	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions