Return to main results Retrieve Phyre Job Id

Job DescriptionP77503
Confidence99.79%DateThu Jan 5 12:30:02 GMT 2012
Rank55Aligned Residues153
% Identity17%Templatec1ebuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.... .....40..... ....50.........60.......
Predicted Secondary structure 









...



...............





Query SS confidence 




























. . .










. . . . . . . . . . . . . . .





















Query Sequence  TSSPLRVAIIGAGQVADKVHASYYCTRND. . . LELVAVCDSRL. . . . . . . . . . . . . . . SQAQALAEKYGNASVWDDPQAM
Query Conservation      


 


 
          
     ...  



 
   ...............      
              
Alig confidence 

















.









...










...............





















Template Conservation 


 






 
 

  .    
          
  
 
                                      

Template Sequence  STKVVNVAVIGAGVVGSA. FLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHL
Template Known Secondary structure 

S

S.T


SS
SSB
TT
S

TTTT



B


Template Predicted Secondary structure 





.


























Template SS confidence 















































































   2.......10......... 20.........30.........40.........50.........60.........70.........80
 
   68.70.........80.........90.........100. ........110.........120.........130.........140.....
Predicted Secondary structure 













..













Query SS confidence 

































. .











































Query Sequence  LLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMC. . EKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQV
Query Conservation 
    

 
 
 

   
      

  

 
  ..


      
   
   
        
    
  
     
  
Alig confidence 

































..











































Template Conservation       




  
    
      


 












    
   
   
   
 
  



  
 


  
   
Template Sequence  KTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAGLPIISFLREII
Template Known Secondary structure  TT
SS

S

TTTT




TTTSS
STS

SSS


GGGSSTTSTT
Template Predicted Secondary structure 

























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   146...150.........160.
Predicted Secondary structure 






Query SS confidence 















Query Sequence  TNGVLGEIYVTTARAL
Query Conservation    
 

 
  
     
Alig confidence 



..









Template Conservation   

 .. 
  
 



Template Sequence  QTGD. . EVEKIEGIFS
Template Known Secondary structure  T
..


Template Predicted Secondary structure 


..

Template SS confidence 















   161... .....170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions