Job Description P76484 Confidence 28.04% Date Thu Jan 5 12:23:29 GMT 2012 Rank 40 Aligned Residues 50 % Identity 22% Template c3qsvD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:mothers against decapentaplegic homolog 4; PDBTitle: structural basis for dna recognition by constitutive smad4 mh1 dimers Resolution 2.71 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		T	L	T	E	L	I	L	R	K	N	K	D	A	G	D	A	L	N	N	I	A	L	A	I	E	Y	E	W	D	L	K	R	K	F	.	.	.	.	.	.	.	.	.	W	F	G	F	A	D	I	Q	L	L	P	P	V	L	Q	T
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	I	E	S	L	V	K	K	L	K	E	K	K	D	E	L	D	S	L	I	T	A	I	T	T	N	G	A	H	P	S	K	C	V	T	I	Q	R	T	L	D	G	R	L	Q	V	A	G	R	K	G	F	P	H	V	I	Y	A
Template Known Secondary structure												S	S														T	T	S	S	S											S	S	S				B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions