Job Description P76484 Confidence 7.67% Date Thu Jan 5 12:23:29 GMT 2012 Rank 87 Aligned Residues 41 % Identity 15% Template c2zkqm_ PDB info PDB header:ribosomal protein/rna Chain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		V	G	I	Q	V	A	R	R	L	L	E	R	T	G	G	D	V	D	E	A	I	K	L	F	H	I	D	Q	I	N	I	L	T	A	K	A	.	.	.	.	.	.	D	V	T	H	Q
Query Conservation																																						.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	R	R	Y	A	H	V	V	L	R	K	A	D	I	D	L	T	K	R	A	G	E	L	T	E	D	E	V	E	R	V	I	T	I	M	Q	N	P	R	Q	Y	K	I	P	D	W
Template Known Secondary structure															T			T	T	S	B	T	T	T	S														T	T		S			S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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