Job Description P76484 Confidence 20.17% Date Thu Jan 5 12:23:29 GMT 2012 Rank 48 Aligned Residues 67 % Identity 15% Template c2cfhD_ PDB info PDB header:transport Chain: D: PDB Molecule:trafficking protein particle complex subunit 6b; PDBTitle: structure of the bet3-tpc6b core of trapp Resolution 2.30 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		D	E	A	I	K	L	F	H	I	D	Q	I	N	I	L	T	A	K	A	D	V	T	H	Q	.	.	E	A	E	N	V	L	L	A	T	N	Y	D	I	A	E	A	L	R	R	I	D	E	Q	R	Y	T	L	T	E	L	I	L	R	K	N	K	D	A	G	D	A	L	N	N	I	A	L	A	I	E	Y	E	W
Query Conservation																										.	.
Alig confidence																										.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	L	F	L	L	L	H	N	E	M	V	S	G	V	Y	K	S	A	E	Q	G	E	V	E	N	G	R	I	T	K	L	E	N	M	G	F	R	V	G	Q	.	.	.	.	.	.	.	.	.	.	G	L	I	E	R	F	T	K	D	T	A	R	F	K	D	E	L	D	I	M	K	F	I	C	K	D	F	W
Template Known Secondary structure															T	T	T																										.	.	.	.	.	.	.	.	.	.											T	T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions