Return to main results Retrieve Phyre Job Id

Job DescriptionP15043
Confidence99.90%DateThu Jan 5 11:34:25 GMT 2012
Rank98Aligned Residues146
% Identity18%Templated1tf5a4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.. .......230.... .....240.........250.........260.........270.........280...
Predicted Secondary structure 










.
..















Query SS confidence 















.











. .
















































Query Sequence  SFDRPNIRYMLMEKFK. PLDQLMRYVQEQ. . RGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQ
Query Conservation 
  
 

         .
   
   
   ..     



 

   
 

  
   

 
  


 
   

  
   
 
Alig confidence 















.











..
















































Template Conservation 
  
 
    
      
   
   
         



         
   
    
    
       

        
Template Sequence  PVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQ
Template Known Secondary structure 






SST

S
TTT



SS
TTTTS
Template Predicted Secondary structure 

























Template SS confidence 















































































   397..400.........410.........420.........430.........440.........450.........460.........470......
 
   284.....290.........300...... ...310.........320.........330.........340.... ....
Predicted Secondary structure 











........














.......
Query SS confidence 






















. . . . . . . .





































. . . . . . .



Query Sequence  RDDLQIVVATVAFGMGINKPNVR. . . . . . . . FVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPAD. . . . . . . MAWL
Query Conservation   
 
 




 
 
 


 



........ 

    
 
 
 
 
  






      

    
.......    
Alig confidence 



..
















........





































.......



Template Conservation     
..

 
     



     
       

  
 
     
 

 

 

 
  
      
  
           
Template Sequence  KGAV. . TIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERT
Template Known Secondary structure  TT
..TTSSTT





TTSGGGTSSS

SSTTSSGGG

TTSSGGGSS
Template Predicted Secondary structure 



..





























Template SS confidence 















































































   477..480 .........490.........500.........510.........520.........530.........540.........550....
 
   349350....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  RRCLEE
Query Conservation        
Alig confidence 





Template Conservation        
Template Sequence  MAMLDR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   555....560
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions