Job Description P15043 Confidence 56.33% Date Thu Jan 5 11:34:25 GMT 2012 Rank 487 Aligned Residues 82 % Identity 11% Template c3qi7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution Resolution 1.86 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		V	Q	E	Q	R	G	K	S	G	I	I	Y	C	N	S	R	A	K	V	E	D	T	A	A	R	L	Q	S	K	G	I	S	A	A	A	Y	H	A	G	L	E	N	N	V	R	A	D	V	Q	E	K	F	Q	R	D	D	L	Q	I	V	V	A	T	V	A	F	G	M	G	I	N	K	P	.	.	.	.	.	.	N
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		L	A	D	D	K	E	V	Q	A	I	V	V	S	T	D	Q	A	G	L	L	P	A	L	Q	K	V	K	E	K	R	P	E	I	I	T	I	S	A	P	X	G	D	D	K	N	Q	L	S	Q	F	.	.	.	.	.	.	V	D	V	N	L	G	V	S	A	E	E	R	G	K	V	L	A	E	R	S	K	E	X	G
Template Known Secondary structure		G	G	G		T	T									S	S															T	T	S					S	S			S									.	.	.	.	.	.	S	S																					T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	F	V	V	H	F	D	I	P	R	N	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	F	I	H	Y	A	S	T	D	D	L	K
Template Known Secondary structure			S								T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions