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Job Description | P15043 | Confidence | 88.02% | Date | Thu Jan 5 11:34:25 GMT 2012 |
Rank | 238 | Aligned Residues | 93 |
% Identity | 19% | Template | c3io5B_ |
PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:recombination and repair protein; |
PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4
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Resolution | 2.40 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
I | I | D | T | V | L | S | G | R | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | M | N | I | A | L | S | G | E | I | T | G | G | M | Q | S | G | L | L | I | L | A | G | P | S | K | S | F | K | S | N | . |
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F | G | L | T | M | V | S | S | Y | M | R | Q | Y | P | D | A | V | C | L | F | Y | D | S | E | F | G | I | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
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105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | E | V | M | T | G | C | R | T | G | Q | I | R | L | L | Y | I | A | P | E | R | L | M | L | D | . |
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N | F | L | E | H | L | A | H | W | N | P | V | L | L | A | V | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | A | Y | L | R | S | M | G | V | D | P | E | R | V | I | H | T | P | V | Q | S | L | E | Q | L | R | I | D | M | V | N | Q | L | D | A | I | E | R | G | E | K | V | V | V | F | I | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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