Job Description P15043 Confidence 64.85% Date Thu Jan 5 11:34:25 GMT 2012 Rank 426 Aligned Residues 198 % Identity 12% Template c3e3mA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of a laci family transcriptional2 regulator from silicibacter pomeroyi Resolution 1.60 Å

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		66	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		G	L	T	V	V	V	S	P	L	.	.	.	.	.	.	I	S	L	M	K	D	Q	V	D	Q	L	Q	A	N	G	V	A	A	A	C	L	N	S	T	Q	T	R	E	Q	Q	L	E	V	M	T	G	C	R	T	G	Q	I	R	L	L	Y	I	A	P	E	R	L	M	L	D	N	F	L	E	H	L	A	H	W	N
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	V	G	L	L	L	P	S	L	N	N	L	H	F	A	Q	T	A	Q	S	L	T	D	V	L	E	Q	G	G	L	Q	L	L	L	G	Y	T	A	Y	S	P	E	R	E	E	Q	L	V	E	T	M	L	R	R	R	P	E	A	M	V	L	S	Y	D	G	H	T	E	Q	T	I	R	L	L	Q	R	A	S	I
Template Known Secondary structure									S		S	S																		T	T									T	T															T			S							S															S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		P	V	L	L	A	.	.	V	D	E	A	H	C	I	S	Q	W	G	H	D	F	R	P	E	Y	A	A	L	G	Q	L	R	Q	R	F	P	T	L	P	F	M	A	L	T	A	T	A	D	D	T	T	R	Q	D	I	V	R	L	L	G	L	N	D	P	L	I	Q	I	S	S	F	D	R	P	N	I	R	Y	M	L
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		P	I	V	E	I	W	E	K	P	A	H	P	I	G	H	T	V	G	F	S	N	E	R	A	A	Y	D	M	T	N	A	L	L	A	R	G	F	R	K	I	V	F	L	G	E	K	D	D	D	W	T	R	G	A	A	R	R	A	G	F	K	R	A	M	R	E	A	G	L	N	P	D	Q	E	I	R	L	G	A	P
Template Known Secondary structure							S	S			S	S		S	S																					T	T			S							S	S		T	T	S																T	T	S		S							S		S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	F	K	P	L	D	Q	L	M	R	Y	V	Q	E	Q	R	G	K	S	G	I	I	Y	C	N	S	R	A	K	V	E	D	T	A	A	R	L	Q	S	K	G	I	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	S	I	E	D	G	V	A	A	A	E	L	I	L	Q	E	Y	P	D	T	D	C	I	F	C	V	S	D	M	P	A	F	G	L	L	S	R	L	K	S	I	G	V	A	V
Template Known Secondary structure		S																		T	T							S	S															T			T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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