Job Description P15043 Confidence 95.77% Date Thu Jan 5 11:34:25 GMT 2012 Rank 176 Aligned Residues 84 % Identity 15% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		43	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure														.										.	.										.	.															.																			.
Query SS confidence														.										.	.										.	.															.																			.
Query Sequence		C	L	V	V	M	P	T	G	G	G	K	S	.	L	C	Y	Q	I	P	A	L	L	.	.	L	N	G	L	T	V	V	V	S	.	.	P	L	I	S	L	M	K	D	Q	V	D	Q	L	Q	.	A	N	G	V	A	A	A	C	L	N	S	T	Q	T	R	E	Q	Q	.	L	E	V	M	T	G	C	R	T	G	Q
Query Conservation														.										.	.										.	.															.																			.
Alig confidence														.										.	.										.	.															.																			.
Template Conservation
Template Sequence		L	L	M	V	G	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	Y	H	I	E	V	F	G	N	P	Q	E	K	D	A	I	K	L	A	K	E	G	V	D	Y	F	K	S	K	G
Template Known Secondary structure								T	T	S	S														T	T	T											S	S	T											G	G	G	T							T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		116	.	.	.		120	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		I	R	L	L	.	Y	I	A	P	E	R	L
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		V	D	I	I	I	V	D	T	A	G	R	H
Template Known Secondary structure			S										S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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