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Job DescriptionP15043
Confidence99.96%DateThu Jan 5 11:34:25 GMT 2012
Rank60Aligned Residues196
% Identity21%Templatec3dkpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALL. . . . . . . LNGLTVVVSPLISLMK
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Template Sequence  YKINSRLLQNILDA. GFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELAS
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Query Sequence  DQVDQLQANGVAAACLNSTQTREQQLEVM. TGCRTGQIRLLYIAPERLMLDNFLEH. . LAHWNPVLLAVDEAHCISQWGH
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Template Sequence  QIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFED. G
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Query Sequence  DFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISS
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Template Sequence  GFRDQLASIFLACTS. HKVRRAMFSATFAYDVEQWCKLNL. . DNVISVSIG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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