Job Description P15043 Confidence 99.85% Date Thu Jan 5 11:34:25 GMT 2012 Rank 113 Aligned Residues 151 % Identity 18% Template c3b6eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain Resolution 1.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		Q	F	R	P	G	Q	E	E	I	I	D	T	V	L	S	G	R	D	C	L	V	V	M	P	T	G	G	G	K	S	L	C	Y	Q	I	P	A	L	L	.	.	.	.	.	.	.	.	.	L	N	G	L	T	V	V	V	S	P	L	I	S	L	M	K	D	Q	V	D	Q	L	Q	A	N	.	.	.	.	G	V	A
Query Conservation																																									.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		Q	L	R	P	Y	Q	M	E	V	A	Q	P	A	L	E	G	K	N	I	I	I	C	L	P	T	G	S	G	K	T	R	V	A	V	Y	I	A	K	D	H	L	D	K	K	K	K	A	S	E	P	G	K	V	I	V	L	V	N	K	V	L	L	V	E	Q	L	F	R	K	E	F	Q	P	F	L	K	K	W	Y	R
Template Known Secondary structure																T	T								S																							T	T										S	S											T						T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	C	L	N	S	T	Q	T	R	E	Q	Q	L	E	V	M	T	G	C	R	T	G	Q	I	R	L	L	Y	I	A	P	E	R	L	M	L	D	N	F	L	E	H	L	A	H	W	N	P	V	L	L	A	V	D	E	A	H	C	I	S	Q	W	G	H	D	F	R	P	E	Y	A	A	L	G	Q	L	R	Q	R
Query Conservation
Alig confidence																		.	.	.	.	.	.	.																				.
Template Conservation																		.	.	.	.	.	.	.																				.
Template Sequence		V	I	G	L	S	G	L	K	I	S	F	P	E	V	V	K	.	.	.	.	.	.	.	S	C	D	I	I	I	S	T	A	Q	I	L	E	N	S	L	L	N	G	.	V	Q	L	S	D	F	S	L	I	I	I	D	E	C	V	Y	N	N	I	M	R	H	Y	L	M	Q	K	L	K	N	N	R	L	K	K	E	N
Template Known Secondary structure																		.	.	.	.	.	.	.			S																	.			G	G	G		S					T	T																							T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.																				.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.								.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		172	.	.				.	.	.	.	.	180	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		F	P	T	.	.	.	L	P	F	M	A	L	T	A	T
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		K	P	V	I	P	L	P	Q	I	L	G	L	T	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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