Job Description P15043 Confidence 73.57% Date Thu Jan 5 11:34:25 GMT 2012 Rank 371 Aligned Residues 139 % Identity 12% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		27	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																																																											.	.	.
Query SS confidence														.	.	.	.	.	.	.																																																											.	.	.
Query Sequence		R	P	G	Q	E	E	I	I	D	T	V	L	.	.	.	.	.	.	.	S	G	R	D	C	L	V	V	M	P	T	G	G	G	K	S	L	C	Y	Q	I	P	A	L	L	L	N	G	L	T	V	V	V	S	P	L	I	S	L	M	K	D	Q	V	D	Q	L	Q	A	N	G	V	A	A	A	C	L	N	.	.	.
Query Conservation														.	.	.	.	.	.	.																																																											.	.	.
Alig confidence														.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A
Template Known Secondary structure												T	T	G	G	G	T	S	S										B		T	T	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T										T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	T	Q	T	R	E	Q	Q	L	E	V	M	T	G	C	R	T	G	Q	I	R	L	L	Y	I	A	P	E	R	L	M	L	D	N	F	L	E	H	L	A	H	W	N	P	V	L	L	A	V	D	E	A	H	C	I	S	Q	W	G	H	D	F	R	P	E	Y	A	A	L	G	Q	L	R	Q	R	F	P	T	L
Query Conservation		.
Alig confidence		.																																																																	.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		R	H	R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V	G	V	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	.	.	.	.	L	Y	R	I	T	R	I	N	Q	E	L
Template Known Secondary structure		T	T	S		S													S					S	S																T	T	S		S								T	T	T					S	T	T					.	.	.	.							G	G	G
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	M	A	L	T	A	T	A	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	L	V	G	I	T	N	S	L	G
Template Known Secondary structure									S		S	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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