Job Description P15043 Confidence 99.71% Date Thu Jan 5 11:34:25 GMT 2012 Rank 125 Aligned Residues 91 % Identity 22% Template c2rrdA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:hrdc domain from bloom syndrome protein; PDBTitle: structure of hrdc domain from human bloom syndrome protein, blm Resolution UNK

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		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	L	K	P	K	A	M	Q	K	S	F	G	G	N	Y	D	R	K	L	F	A	K	L	R	K	L	R	K	S	I	A	D	E	S	N	V	P	P	Y	V	V	F	N	D	A	T	L	I	E	M	A	E	Q	M	P	I	T	A	S	E	M	L	S	V	N	G	V	G	M	R	K	L	E	R	F	G	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	K	Q	K	A	L	V	A	K	V	S	Q	R	E	E	M	V	K	K	C	L	G	E	L	T	E	V	C	K	S	L	G	K	V	F	G	V	H	Y	F	N	I	F	N	T	V	T	L	K	K	L	A	E	S	L	S	S	D	P	E	V	L	L	Q	I	D	G	V	T	E	D	K	L	E	K	Y	G	A	E
Template Known Secondary structure				S		S	S				S	S	S																								T	T																												T	S	T	T									T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		595	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	A	L	I	R	A	H	V	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	S	V	L	Q	K	Y	S	E	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions