Job Description P15043 Confidence 99.93% Date Thu Jan 5 11:34:25 GMT 2012 Rank 80 Aligned Residues 137 % Identity 26% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Y	M	L	M	E	K	F	K	P	L	D	Q	L	M	R	Y	V	Q	E	Q	R	G	K	S	G	I	I	Y	C	N	S	R	A	K	V	E	D	T	A	A	R	L	Q	S	K	G	I	S	A	A	A	Y	H	A	G	L	E	N	N	V	R	A	D	V	Q	E	K	F	Q	R	D	D	L	Q	I	V	V	A
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		Q	E	V	E	Y	V	K	E	E	A	K	M	V	Y	L	L	E	C	L	Q	K	T	P	P	.	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V	L	V	A
Template Known Secondary structure									G	G	G										T	T	S		S	.							S																T								T	T	S															T	S		S
Template Predicted Secondary structure																										.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		T	V	A	F	G	M	G	I	N	K	P	N	V	R	F	V	V	H	F	D	I	P	R	N	I	E	S	Y	Y	Q	E	T	G	R	A	G	R	D	G	L	P	A	E	A	M	L	F	Y	D	P	A	.	D	M	A	W	L	R	R	C	L	E
Query Conservation																																																					.
Alig confidence																																										.	.	.									.
Template Conservation																																										.	.	.
Template Sequence		T	D	V	A	S	K	G	L	D	F	P	A	I	Q	H	V	I	N	Y	D	M	P	E	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	T	G	I	.	.	.	A	T	T	F	I	N	K	A	C	D	E	S	V	L	M	D	L	K	A
Template Known Secondary structure							T	T							S					S	S			S	S									T	T	S						.	.	.							T	T	S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.				.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions