Job Description P15043 Confidence 92.82% Date Thu Jan 5 11:34:25 GMT 2012 Rank 205 Aligned Residues 79 % Identity 18% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		43	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure														.											.	.	.									.	.														.																			.
Query SS confidence														.											.	.	.									.	.														.																			.
Query Sequence		C	L	V	V	M	P	T	G	G	G	K	S	.	L	C	Y	Q	I	P	A	L	L	L	.	.	.	N	G	L	T	V	V	V	S	.	.	P	L	I	S	L	M	K	D	Q	V	D	Q	L	.	Q	A	N	G	V	A	A	A	C	L	N	S	T	Q	T	R	E	Q	.	Q	L	E	V	M	T	G	C	R	T	G
Query Conservation														.											.	.	.									.	.														.																			.
Alig confidence														.											.	.	.									.	.														.																			.
Template Conservation
Template Sequence		V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K
Template Known Secondary structure							S	S	S	S	S	S	T	T	T										T	S	S	S					B						S	S	S		S											T	T							S	S				T	T													T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		115	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	R	L	L	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	D	V	L	L	V
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions