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Job DescriptionP15043
Confidence57.79%DateThu Jan 5 11:34:25 GMT 2012
Rank471Aligned Residues196
% Identity9%Templatec2ioyB_
PDB info PDB header:sugar binding proteinChain: B: PDB Molecule:periplasmic sugar-binding protein; PDBTitle: crystal structure of thermoanaerobacter tengcongensis2 ribose binding protein
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GLTVVVSPL. . . . . . ISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIR. LLYIAPERLMLDNFLEHLAHW
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Template Sequence  KTIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSK
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Query Sequence  NPVLLAVD. . . . EAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIR
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Template Sequence  NIPVITIDRSANGGDVVCHIASDNVKGGEMAAEFIAKALKGKGNVVELEGIPGASAARDRGKGFDEAIAKYPDIKIVAKQ
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   215....220.........230.........240.........250.........260..
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Query Sequence  YMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGIS
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Template Sequence  AADFDRSKGLSVMENILQAQP. KIDAVFAQNDEMALGAIKAIEAANRQ
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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