Job Description P15043 Confidence 99.72% Date Thu Jan 5 11:34:25 GMT 2012 Rank 124 Aligned Residues 117 % Identity 17% Template c2fzlA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad25, xpb; PDBTitle: structure of c-terminal domain of archaeoglobus fulgidus xpb Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	F	K	P	L	D	Q	L	M	R	Y	V	Q	E	Q	R	G	K	S	G	I	I	Y	C	N	S	R	A	K	V	E	D	T	A	A	R	L	Q	S	K	G	I	S	A	A	A	Y	H	A	G	L	E	N	N	V	R	A	D	V	Q	E	K	F	Q	R	D	D	L	Q	I	V	V	A	T	V	A	F	G	M
Query Conservation
Alig confidence																																							.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		N	S	K	N	K	I	R	K	L	R	E	I	L	E	R	H	R	K	D	K	I	I	I	F	T	R	H	N	E	L	V	Y	R	I	S	K	V	.	.	.	.	.	F	L	I	P	A	I	T	H	R	T	S	R	E	E	R	E	E	I	L	E	G	F	R	T	G	R	F	R	A	I	V	S	S	Q	V	L	D	E
Template Known Secondary structure		T															T	T	T	S							S												.	.	.	.	.	S							S	S	S		S											T	T	S	S		S					S	S		S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	K	P	N	V	R	F	V	V	H	F	D	I	P	R	N	I	E	S	Y	Y	Q	E	T	G	R	A	G	R	D	G	L	P	A	E	A	M	L	F	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	D	V	P	D	A	N	V	G	V	I	M	S	G	S	G	S	A	R	E	Y	I	Q	R	L	G	R	I	L	R	P	S	K	G	K	K	E	A	V	L	Y
Template Known Secondary structure		S														S	S	S																	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions