Return to main results Retrieve Phyre Job Id

Job DescriptionP15043
Confidence90.25%DateThu Jan 5 11:34:25 GMT 2012
Rank221Aligned Residues140
% Identity20%Templatec1xxhB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dna polymerase iii subunit gamma; PDBTitle: atpgs bound e. coli clamp loader complex
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GQEEIIDTVLS. . . . . . . GRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNS. . TQ
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Template Sequence  GQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRT
Template Known Secondary structure  S
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S

STTSSS
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S
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ST
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   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  TREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMA
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Template Sequence  KVEDTRDLLDNVQYAP. . . . . . . . . . . . . . . . . . . . ARGRFKVYLIDEVHMLSRHS. . . . . . FNALLKTLEEPPEHVKFL
Template Known Secondary structure  TTTT


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TGGG

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   100.........110..... ....120.........130..... ....140.........150...
 
   180.........190....
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Query Sequence  LTATADDTTRQDIVR
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Template Sequence  LATTDPQKLPVTILS
Template Known Secondary structure  S
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   154.....160........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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