Job Description P15043 Confidence 94.11% Date Thu Jan 5 11:34:25 GMT 2012 Rank 191 Aligned Residues 129 % Identity 16% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																		.								.	.
Query SS confidence																		.								.	.
Query Sequence		S	G	R	D	C	L	V	V	M	P	T	G	G	G	K	S	.	L	C	Y	Q	I	P	A	.	.	L	L	L	N	G	L	T	V	V	V	S	P	L	I	S	L	M	K	D	Q	V	D	Q	L	Q	A	N	G	V	A	A	A	C	L	N	S	T	Q	T	R	E	Q	Q	L	E	V	M	T	G	C	R	T	G	Q
Query Conservation																		.								.	.
Alig confidence																		.								.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	.	A	Q	L	L	R	N	A	Y	S	W	G	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	M	E	R	Q	N	L
Template Known Secondary structure		S	S									T	T	S	S														T	T	T								S	S	S			.									T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.																.	.	.	.	.	340	.	.	.
		116	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure													.	.	.	.																																.	.
Query SS confidence													.	.	.	.																																.	.
Query Sequence		I	R	L	L	Y	I	A	P	E	R	L	.	.	.	.	M	L	D	N	F	L	E	H	L	A	H	W	N	P	V	L	L	A	V	D	E	A	H	C	I	S	Q	W	G	H	D	.	.	F	R	P	E	Y	A	A	L	G	Q	L	R	Q	R	F	P	T	L	P	F	M	A	L	T	A	T
Query Conservation													.	.	.	.																																.	.
Alig confidence													.	.	.	.																																.	.
Template Conservation
Template Sequence		L	K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y	A	K	Q	E	E	I	T	G	L	F	T	N	T	S	D
Template Known Secondary structure									G	G	G	S															T	T			S											T	S	S	S																			T	T										S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions