Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEZ9
Confidence56.46%DateThu Jan 5 11:24:43 GMT 2012
Rank150Aligned Residues66
% Identity11%Templatec3q41B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:glutamate [nmda] receptor subunit zeta-1; PDBTitle: crystal structure of the glun1 n-terminal domain (ntd)
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.......
Predicted Secondary structure 


























Query SS confidence 





































































Query Sequence  FIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITG
Query Conservation    
 
  



 
  
   
 
   
   
   
  
     
 

   
   
  
      






Alig confidence 

















...






































.








Template Conservation    
  



         ...    
       
  
           
    
  
   .   


   
Template Sequence  YNWNHIILLVSDDHEGRA. . . AQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEAREL. EARVIILSA
Template Known Secondary structure  B



SS...TTSS


TT
S

TS.S



Template Predicted Secondary structure 









...









.


Template SS confidence 





































































   158.160.........170..... ....180.........190.........200.........210.... .....220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions