 |
Job Description | P0AEZ9 | Confidence | 23.57% | Date | Thu Jan 5 11:24:43 GMT 2012 |
Rank | 343 | Aligned Residues | 84 |
% Identity | 13% | Template | c3mtjA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:homoserine dehydrogenase; |
PDBTitle: the crystal structure of a homoserine dehydrogenase from thiobacillus2 denitrificans to 2.15a
|
Resolution | 2.15 Å |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
I | P | T | R | I | A | I | L | T | V | S | N | R | R | G | E | E | D | D | T | S | G | H | Y | L | R | D | S | A | Q | E | A | G | H | H | V | V | D | K | A | I | V | K | E | N | R | Y | A | I | R | A | Q | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | W | I | A | S | D | D | V | Q | V | V | L | . |
I | T | G | G |
Query Conservation |   |
  |
|   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|
|
|
| . |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|   |
|
|   |
Template Sequence |   |
K | P | I | H | V | G | L | L | G | L | G | T | V | G | G | G | T | L | T | V | L | R | R | N | A | E | E | I | T | R | R | A | G | R | E | I | R | V | V | R | A | A | V | R | N | L | D | K | A | E | A | L | A | G | G | L | P | L | T | T | N | P | F | D | V | V | D | D | P | E | I | D | I | V | V | E | L | I | G | G |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T |
|
|  |  | S |
| T |  |  |  |  | T |
| T | T |
|
|  |  |  |  |
|
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | L | T | E | G | D | Q | A | P | E | A | L | L | P |
Query Conservation |   |
  |
|   |
|   |   |
|   |
|   |
|
|
|   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . |   |
|   |   |   |
|   |   |
|
|   |
|
Template Sequence |   |
L | E | . |
P | A | R | E | L | V | X | Q | A | I | A | N |
Template Known Secondary structure |   |
S | T | . | T |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  | . |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|