 |
Job Description | P0AEZ9 | Confidence | 30.97% | Date | Thu Jan 5 11:24:43 GMT 2012 |
Rank | 291 | Aligned Residues | 71 |
% Identity | 20% | Template | c3l7nA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:putative uncharacterized protein; |
PDBTitle: crystal structure of smu.1228c
|
Resolution | 2.70 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | I | A | I | L | T | V | S | N | R | R | G | E | E | D | D | T | S | G | H | Y | L | R | D | S | A | Q | E | A | G | H | H | V | V | D | K | A | I | . |
. |
. |
. |
. |
V | K | E | N | R | Y | A | I | R | A | Q | V | S | A | W | I | A | S | D | D | V | Q | V | V | L | I | T | G | G | T | G | L | T | E | G | D |
Query Conservation |   |
  |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   | . | . | . | . | . |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |
|   |   | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |
Template Sequence |   |
M | R | I | H | F | I | L | H | E | T | . |
. |
. |
. |
. |
. |
F | E | A | P | G | A | Y | L | A | W | A | A | L | R | G | H | D | V | S | M | T | K | V | Y | R | Y | E | K | L | P | K | D | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | F | D | M | L | I | L | M | G | G | P | Q | S | P | S | S | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| T | . | . | . | . | . | . | T | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | G | G | G | T |
|
|
|
| S |
| G | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G |
| S |  |  |  |  |
|
|
| S | S |
| T | T |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
  |   |
86 | |
|
|
|
|
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | E | A | L | L | P | L | F | D | R | E | V | E |
Query Conservation |   |
  | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
K | K | E | F | P | Y | Y | D | A | Q | A | E | V | K | L | I | Q | K | A | A | K | S | E | K | I |
Template Known Secondary structure |   |
T | T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|