Job Description P0AEZ9 Confidence 99.97% Date Thu Jan 5 11:24:43 GMT 2012 Rank 13 Aligned Residues 142 % Identity 15% Template c3kbqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		R	I	A	I	L	T	V	S	N	R	.	.	R	G	E	E	D	D	T	S	G	H	Y	L	R	D	S	A	Q	E	A	G	H	H	V	V	D	K	A	I	V	K	E	N	R	Y	A	I	R	A	Q	V	S	A	W	I	A	S	D	D	V	Q	V	V	L	I	T	G	G	T	G	L	T	E	G	D	Q	A	P	E
Query Conservation												.	.
Alig confidence												.	.																																															.	.
Template Conservation																																																												.	.
Template Sequence		N	A	S	V	I	T	V	G	N	E	I	L	K	G	R	T	V	N	T	N	A	A	F	I	G	N	F	L	T	Y	H	G	Y	Q	V	R	R	G	F	V	V	M	D	D	L	D	E	I	G	W	A	F	R	V	A	L	E	V	.	.	S	D	L	V	V	S	S	G	G	L	G	P	T	F	D	D	M	T	V	E
Template Known Secondary structure														T	T	S	S															T	T											S																.	.		S						S			S	S	S	T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	L	P	L	F	D	R	E	V	E	G	F	G	E	V	F	R	M	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	I	G	T	S	T	L	Q	S	R	A	V	A	G	V	A	N	K	T	L	I	F	A	M	P	G	S	T	K	A	C	R	T	A	W	E	N	I	I
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	A	K	C	I	G	Q	D	L	R	I	D	E	D	A	L	A	M	I	K	K	K	Y	G	L	T	P	Q	R	L	K	M	A	K	I	P	P	S	C	R	P	I	E	N	P	V	G	T	A	P	G	L	I	C	A	V	G	G	K	K	V	I	I	L	P	G	V	P	K	E	M	E	A	L	L	K	A	M	E
Template Known Secondary structure								T																									G	G	G				T	T							S	S	S	S	S								T	T								S	S											T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		152	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions