 |
Job Description | P0AEZ9 | Confidence | 26.99% | Date | Thu Jan 5 11:24:43 GMT 2012 |
Rank | 320 | Aligned Residues | 51 |
% Identity | 16% | Template | c3hv2B_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:response regulator/hd domain protein; |
PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
|
Resolution | 1.50 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | A | I | L | T | V | S | N | R | R | G | E | E | D | D | T | S | G | H | Y | L | R | D | S | A | Q | E | A | G | H | H | V | V | D | K | A | I | V | K | E | N | R | Y | A | I | R | A | Q | V | S | A | W | I | A | S | D | D | V | Q | V | V | L | I |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|   |   |   |   |   |   | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . |   |   |   |
|   |
|
|   |
Template Sequence |   |
R | P | E | I | L | L | V | D | S | Q | E | V | I | L | Q | . |
. |
. |
. |
. |
R | L | Q | Q | L | L | S | P | L | P | Y | T | L | H | F | A | R | . |
. |
. |
. |
D | A | T | Q | A | L | Q | L | L | A | S | . |
. |
. |
. |
R | E | V | D | L | V | I | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
| S |
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  | S | . | . | . | . | S |  |  |  |  |  |  |  |  | T | T | . | . | . | . | S |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
. | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|