Job Description P0AEZ9 Confidence 37.32% Date Thu Jan 5 11:24:43 GMT 2012 Rank 247 Aligned Residues 73 % Identity 15% Template c3brsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator; PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																		.
Query SS confidence												.	.	.	.	.	.	.																		.
Query Sequence		G	E	E	D	D	T	S	G	H	Y	.	.	.	.	.	.	.	L	R	D	S	A	Q	E	A	G	H	H	V	V	D	K	A	I	.	V	K	E	N	R	Y	A	I	R	A	Q	V	S	A	W	I	A	S	D	D	V	Q	V	V	L	I	T	G	G	T	G	L	T	E	G	D	Q	A	P	E	A	L	L	P	L
Query Conservation												.	.	.	.	.	.	.																		.
Alig confidence												.	.	.	.	.	.	.																		.																			.									.	.	.	.
Template Conservation																																																							.									.	.	.	.
Template Sequence		P	K	V	L	D	D	S	S	D	F	W	S	V	L	V	E	G	A	Q	M	A	A	K	E	Y	E	I	K	L	E	F	M	A	P	E	K	E	E	D	Y	L	V	Q	N	E	L	I	E	E	A	I	K	R	.	K	P	D	V	I	L	L	A	.	.	.	.	A	A	D	Y	E	K	T	Y	D	A	A	K	E	I
Template Known Secondary structure			S				S	S	S																		T									S	S	T	T															T	.			S						.	.	.	.		S		T	T	T	T					T	T	T
Template Predicted Secondary structure																																																							.									.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.
		95	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	R	E	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	A	G	I	K
Template Known Secondary structure		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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