Job Description P0AEZ9 Confidence 79.66% Date Thu Jan 5 11:24:43 GMT 2012 Rank 71 Aligned Residues 81 % Identity 12% Template c2vk2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter periplasmic-binding protein ytfq; PDBTitle: crystal structure of a galactofuranose binding protein Resolution 1.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	R	I	A	I	L	T	V	S	N	R	R	G	E	E	D	D	T	S	G	H	Y	L	R	D	S	A	Q	E	A	G	H	H	V	V	D	K	A	I	V	K	E	N	R	Y	A	I	R	A	Q	V	S	A	W	I	A	S	D	D	V	Q	V	V	L	I	T	G	G	T	G	L	T	E	G	D	Q	A	P	E
Query Conservation
Alig confidence											.																															.																		.
Template Conservation											.																															.																		.
Template Sequence		P	L	T	V	G	F	S	Q	V	.	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	.	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	.	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P	V	L	K	E
Template Known Secondary structure											.				S																		T									.	T	T																.	T		S							S	S	S	S	S
Template Predicted Secondary structure											.																															.																		.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	D	A
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions