Job Description P0AEZ9 Confidence 99.97% Date Thu Jan 5 11:24:43 GMT 2012 Rank 14 Aligned Residues 150 % Identity 21% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.										.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		F	I	P	T	R	I	A	I	L	T	V	S	N	R	.	.	.	.	.	.	.	.	.	R	G	E	E	D	D	T	S	G	H	Y	L	R	D	S	A	Q	E	A	G	H	H	V	V	D	K	A	I	V	K	E	N	R	Y	A	I	R	A	Q	V	S	A	W	I	A	S	D	D	V	Q	V	V	L	I	T	G	G
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																																															.	.
Template Conservation																																																																							.	.
Template Sequence		N	K	F	P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R	.	.	A	D	V	I	I	T	S	G	G
Template Known Secondary structure														T	T				T	T	S				T	T																	T	T											S																.	.		S						S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.			.	.	.	.	.	570	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		T	G	L	T	E	G	D	Q	A	P	E	A	L	L	P	L	F	D	R	E	V	E	G	F	G	E	V	F	R	M	L	S	F	E	E	I	G	T	S	T	L	Q	S	R	A	V	A	G	V	A	N	.	.	.	.	K	T	L	I	F	A	M	P	G	S	T	K	A	C	R	T	A	W	E	N	I	I	A	P	Q
Query Conservation																																																					.	.	.	.
Alig confidence																							.	.	.	.	.																	.	.	.	.	.	.				.	.	.	.
Template Conservation																							.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		V	S	M	G	E	K	D	Y	L	K	Q	V	L	D	I	D	L	H	A	Q	I	.	.	.	.	.	H	F	G	R	V	F	M	K	P	G	L	P	T	T	F	A	.	.	.	.	.	.	T	L	D	I	D	G	V	R	K	I	I	F	A	L	P	G	N	P	V	S	A	V	V	T	C	N	L	F	V	V	P	A
Template Known Secondary structure			S	S	S	S	T										T	T					.	.	.	.	.			S			S		B	S		T	T					.	.	.	.	.	.					T	T										S	S
Template Predicted Secondary structure																							.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.						.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610							.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	R	T	R	P	C	N	F	H	P	H	L	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	K	M	Q	G	I	L	D	P	R	P	T	I	I	K
Template Known Secondary structure						T	T		S			S
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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