Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E0
Confidence89.75%DateThu Jan 5 11:09:58 GMT 2012
Rank142Aligned Residues42
% Identity12%Templated1mkma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator IclR, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   174.....180.........190.........200.........210.......
Predicted Secondary structure 










Query SS confidence 











































Query Sequence  PMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQ
Query Conservation       
      
         

  

     
   
 
 

 
Alig confidence 















..

























Template Conservation   

 
 
 

  
   ..    
  


  

   

  
 
 
Template Sequence  NTLKKAFEILDFIVKN. . PGDVSVSEIAEKFNMSVSNAYKYMVV
Template Known Secondary structure  TT
..SS
B
TT

Template Predicted Secondary structure 
..







Template SS confidence 











































   2.......10....... ..20.........30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions