Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E0
Confidence98.85%DateThu Jan 5 11:09:58 GMT 2012
Rank14Aligned Residues52
% Identity17%Templated1bl0a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210.........220........
Predicted Secondary structure 












Query SS confidence 




















































Query Sequence  DNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWRE
Query Conservation     
      
         

  

     
   
 
 

   
 
   

 
Alig confidence 

















.

































Template Conservation     
  
  

       .


  

     
   
 
 

   
 
   

 
Template Sequence  AITIHSILDWIEDNLESP. LSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIR
Template Known Secondary structure  TTTTS
.


SSS
SS
Template Predicted Secondary structure 



.








Template SS confidence 




















































   10.........20....... ..30.........40.........50.........60.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions