Job Description P0A9E0 Confidence 57.91% Date Thu Jan 5 11:09:58 GMT 2012 Rank 456 Aligned Residues 151 % Identity 9% Template c3iwzB_ PDB info PDB header:transcription Chain: B: PDB Molecule:catabolite activation-like protein; PDBTitle: the c-di-gmp responsive global regulator clp links cell-cell signaling2 to virulence gene expression in xanthomonas campestris Resolution 2.30 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		R	P	G	D	I	L	L	F	P	P	G	E	I	H	H	Y	G	R	H	P	E	A	R	E	W	Y	H	Q	W	V	Y	F	R	P	R	A	Y	W	H	E	W	L	.	N	W	P	S	I	F	A	N	T	G	F	F	R	P	D	E	A	H	Q	P	H	F	S	D	L	F	G	Q	I	I	N	A	G	Q	G	E	G
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		P	A	G	T	L	Y	Y	V	I	S	G	S	V	S	I	I	A	E	E	D	D	D	R	E	L	V	L	G	Y	F	G	S	G	E	F	V	G	E	M	G	L	F	I	E	S	D	T	R	E	V	I	L	R	T	R	T	Q	C	E	L	A	E	I	S	Y	E	R	L	Q	Q	L	F	Q	T	S	L	S	P	D	A
Template Known Secondary structure		B										S									T	T	S										T	T				S						S			S	B			S					S	S																		T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		R	Y	S	E	L	L	A	I	N	L	L	E	Q	L	L	L	R	R	M	E	A	I	N	E	S	L	H	P	P	M	D	N	R	V	R	E	A	C	Q	Y	I	S	D	H	L	A	D	S	N	.	.	.	.	.	.	.	.	F	D	I	A	S	V	A	Q	H	V	C	L	S	P	S	R	L	S	H	L	F	R	Q
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	I	L	Y	A	I	G	V	Q	L	S	K	R	L	L	D	T	T	R	K	A	S	R	L	A	F	L	D	V	T	D	R	I	V	R	T	L	H	D	L	S	K	E	P	E	A	M	S	H	P	Q	G	T	Q	L	R	V	S	R	Q	E	L	A	R	L	V	G	C	S	R	E	M	A	G	R	V	L	K	K
Template Known Secondary structure																													S														T	T	S	T	T				B	T	T	B															T	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions