Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9E0
Confidence77.46%DateThu Jan 5 11:09:58 GMT 2012
Rank336Aligned Residues40
% Identity13%Templatec2zcmB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional PDBTitle: crystal structure of icar, a repressor of the tetr family
Resolution1.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210......
Predicted Secondary structure 









Query SS confidence 








































Query Sequence  DNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFR
Query Conservation     
      
         

  

     
   
 
 

Alig confidence 













.

























Template Conservation    

 

  
    .
    

  

  



  


  
 
Template Sequence  DKIIDNAITLFSEK. GYDGTTLDDISKSVNIKKASLYYHYD
Template Known Secondary structure  .
TTT

TT

GGGGGGT
S
Template Predicted Secondary structure  .










Template SS confidence 








































   3......10...... ...20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions