Job Description P0A9E0 Confidence 88.72% Date Thu Jan 5 11:09:58 GMT 2012 Rank 151 Aligned Residues 86 % Identity 6% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		R	E	A	C	Q	Y	I	S	D	H	L	A	D	S	N	F	D	I	A	S	V	A	Q	H	V	C	L	S	P	S	R	L	S	H	L	F	R	Q	Q	L	.	.	.	.	.	.	.	.	G	I	S	V	L	S	W	R	E	D	Q	R	I	S	Q	A	K	L	L	L	S	T	T	R	M	P	I	A	T	V	G	R
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																.																										.	.	.	.	.	.	.	.				.	.
Template Conservation																.																																					.	.
Template Sequence		D	T	E	R	A	Q	L	D	V	M	K	L	L	N	.	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	.	.	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N
Template Known Secondary structure														T	T	.											T												S	G	G	G	T	T									.	.		S	S
Template Predicted Secondary structure																.																																					.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		252	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		N	V	G	F	D	.	D	Q	L	Y	F	S	R	V	F	K	K	C
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		E	L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure			T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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