Job Description P14081 Confidence 99.81% Date Thu Jan 5 11:33:54 GMT 2012 Rank 81 Aligned Residues 155 % Identity 23% Template c3lx8A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:ferrous iron uptake transporter protein b; PDBTitle: crystal structure of gdp-bound nfeob from s. thermophilus Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	.	.	.	.	.	.	.	.	E	K	F	L	S	N	M	L	A	G	V	G	G
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																			.	.															.	.	.	.	.	.	.	.
Template Conservation																								.	.	.																			.	.
Template Sequence		I	A	L	I	G	N	P	N	S	G	K	T	S	L	F	N	L	I	T	G	H	N	.	.	.	Q	R	V	G	N	W	P	G	V	T	V	E	R	K	S	G	L	V	.	.	K	K	N	K	D	L	E	I	Q	D	L	P	G	I	Y	S	M	S	P	Y	S	P	E	E	K	V	A	R	D	Y	L	L	S	Q	R
Template Known Secondary structure							S	T	T	S	S										T	T		.	.	.							T	T	S	S	S								.	.	S	S		T	T										S	S			S	S	S												T	T
Template Predicted Secondary structure																								.	.	.																			.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	H	A	L	L	V	V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M
Query Conservation
Alig confidence															.	.																	.																												.	.	.	.	.	.
Template Conservation															.	.																	.																												.	.	.	.	.	.
Template Sequence		A	D	S	I	L	N	V	V	D	A	T	N	L	.	.	E	R	N	L	Y	L	T	T	Q	L	I	E	T	G	I	P	.	V	T	I	A	L	N	M	I	D	V	L	D	G	Q	G	K	K	I	N	V	D	K	L	S	Y	H	L	.	.	.	.	.	.	G	V	P	V	V	A	T	S	A	L	K	Q	T	G	V
Template Known Secondary structure			S								S	T	T		.	.												T	T	S	S		.																												.	.	.	.	.	.	T	S						B	T	T	T	T	B	S
Template Predicted Secondary structure															.	.																	.																												.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	R	E	H	L	L	Q	L	P	E	R	E	H	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	V	V	K	K	A	A	H	T	T	T	S	T	V	G	D
Template Known Secondary structure											S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions